Orthologous Groups among Oryza indica, Oryza japonica, Arabidopsis, Brachypodium, Maize, Poplar, Grapevine and Sorghum.

Orthologous Groups among Oryza indica, Oryza japonica, Arabidopsis, Brachypodium, Maize, Poplar and Grapevine. You can do orthologous groups searches using for different species locus (MH07g0048400/ZS07g0055600/LOC_Os07g05400) by submitting your query in the search box above. A total of 366,949 representative peptide sequences from Oryza japonica Nipponbare (release 7), Oryza indica MH63 ( relase 1), Oryza indica ZS97 (release 1), Arabidopsis (release 10), Populus trichocarpa (release 2.0), grapevine (release 1_12x), maize (release 4), and Brachypodium (release 1.0) were used for identification of putative orthologous groups using OrthoMCL with default parameters. A total of 48,515 putative orthologous groups including in-paralogs were identified. The list of orthologous groups can be downloaded here.