Help
Contact Us
Site Map
Home
Search
Gene locus
BLAST
Sequence Fetch
Cloned gene
Metabolite
Gene expression
Protein-protein Interactions
GBrowse
ZS97RS1
MH63RS1
Gbrowse_syn_MHZS
Gbrowse_syn_Nip
Pathway
Pathway-MH63
Pathway-ZS97
Tools
Homologous regions
Orthologous
CRISPR-design
KEGG/GO enrichment
GO slim classification
ID conversion
Literature
Download
Links
RS1
RS2
RS3
Gene list
Number
Gene
Gene Symbol
Method of Isolation
Chr
Locus ID (MSU)
MH63 ID
ZS97 ID
Same or not in MH63 and ZS97
Function
381
Rice phosphatidylinositol monophosphate kinase
OsPIPK1
Knockdown
3
LOC_Os03g49510
MH03g0596800
ZS03g0634400
Collinear
OsPIPK1 is involved in rice heading through regulation of floral induction genes, signaling and metabolic pathways.
382
Rice PINHEAD/ZWILLE gene
OsPNH1
Others
6
LOC_Os06g39640
MH06g0569200
ZS06g0522100
Nonsynonymous
OsPNH1 functions not only in SAM maintenance as previously thought, but also in leaf formation through vascular development.
383
Rice TEOSINTE BRANCHED 1; TCP family transcription factor
OsTB1; FC1
Overexpression
3
LOC_Os03g49880
MH03g0600700
ZS03g0637900
Same
OsTB1 functions as a negative regulator for lateral branching in rice, presumably through expression in axillary buds.
384
STAMENLESS 1
SL1
Mutant
1
LOC_Os01g03840
MH01g0045000
ZS01g0035800
Nonsynonymous
Regulation of floral organ identity in rice
385
Histone deacetylase
OsHDAC1
T-DNA insertion
6
LOC_Os06g38470
MH06g0550500
ZS06g0508300
Nonsynonymous
Controling seedling root growth in rice
386
Pentatricopeptide repeat?CDYW protein
OGR1
Mutant
12
LOC_Os12g17080
MH12g0168400
ZS12g0162900
Collinear
Essential for RNA editing in mitochondria
387
BZIP transcription factor
RISBZ1; OsbZIP58
Homlog cloning
7
LOC_Os07g08420
MH07g0094500
ZS07g0095300
Same
Responsible for endosperm-specific expression of storage protein genes
389
/ hydrolase-fold family protein
NYC3
Mutant
6
LOC_Os06g24730
MH06g0329700
ZS06g0322800
Same
Regulating leaf senescence in the process of degradation of chlorophyll
390
C2H2-type zinc finger protein
ZFP15
RT-PCR
3
LOC_Os03g60570
MH03g0733200
ZS03g0767000
Divergent
Regulaion of spike development
391
Promoter of Shoot Regeneration 1
PSR1
Map-based cloning
1
LOC_Os01g25484
MH01g0288800
ZS01g0285600
Nonsynonymous
Rice regeneration
First
Previous
1
2
...
29
30
31
32
33
34
35
...
316
317
Next
Last
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317