| |
Number |
Gene |
Gene Symbol |
Method of Isolation |
Chr |
Locus ID (MSU) |
MH63 ID |
ZS97 ID |
Same or not in MH63 and ZS97 |
Function |
| |
| |
38 |
Magnaporthe grisea resistance-k |
Pik |
Others |
11 |
Pik |
MH02g0699000 |
ZS02g0708000 |
Collinear |
Resistant to rice blast disease. Varieties 'Kanto 51' and 'Kusabue' have this gene. |
| |
51 |
Thermosensitive male sterility-5 |
tms5; ZS1 |
Map based clone |
2 |
LOC_Os02g12290 |
MH02g0115600 |
ZS02g0125900 |
Nonsynonymous |
Thermo-sensitive genic male-sterility gene |
| |
53 |
Pollen fertility restoration-2 |
Rf2; Rfx |
cDNA clone |
2 |
LOC_Os02g17380 |
MH02g0181400 |
NA |
PAV |
Anther,fertility restorer gene for Lead Rice-type cytoplasmic male sterility. |
| |
61 |
Dwarf 61 |
d61; OsBRI1 |
cDNA clone |
1 |
LOC_Os01g52050 |
MH01g0570600 |
ZS01g0578700 |
Same |
This gene functions in various growth and developmental processes in rice, including internode elongation, bending of the lamina joint, and skotomorphogenesis. |
| |
62 |
Tanginbozu dwarf; dwarf-35;ent-kaurene oxidase gene;Gibberellin Biosynthesis Enzyme |
d35; OsKO2; OsKOL2; OsKOS3 |
Others |
6 |
LOC_Os06g37364 |
MH06g0529400 |
ZS06g0484500 |
Collinear |
This gene encodes one of the GA metabolic enzymes, ent-kaurene oxidase (K0). |
| |
89 |
Earliness-1 |
Ef-1 |
Others |
10 |
NA |
MH10g0400500 |
ZS10g0432300 |
Same |
This gene controls basic vegetative growth period. |
| |
94 |
Late-heading |
ef1-h |
Mutant |
10 |
ef1-h |
MH10g0329300 |
ZS10g0360400 |
Nonsynonymous |
Influence rice's heading and maturity, control rice basic vegetative growth, photoperiod insensitive |
| |
99 |
Glutamine synthetase |
OsGSr; OsGS1;2; OsGLN1;2; GS8 |
Full-length cDNA clones |
3 |
LOC_Os03g12290 |
MH03g0120700 |
ZS03g0114000 |
Same |
GS1;1 is important for normal growth and grain filling in rice; GS1;2 and GS1;3 were not able to compensate for GS1;1 function.Involved in the Tolerance to High Temperature and Modulates Amino Acid Metabolism |
| |
106 |
QTLCold tolerance at booting stage-1 |
Ctb1 |
Map based clone |
4 |
NA |
MH04g0631000 |
ZS04g0749300 |
Same |
This QTL controls cold tolerance and affects anther length (large anther) |
| |
108 |
Brittle culm 3 |
BC3; OsDRP2B |
Map based clone |
2 |
LOC_Os02g50550 |
MH02g0608000 |
ZS02g0626200 |
Nonsynonymous |
A brittle or soft culm. Rather short height and imperfect emergence of panicles. The brittleness of culm and panicle axis of this mutant is not so distinct as that of bc1 and bc2. |
