Rice Information GateWay (RIGW)
Name: LOC_Os01g01040
Type: gene
Description: expressed protein
Source: MSU_osa1r7
Position: chr01:16292..20323 (+ strand)
Length: 4032
Note: expressed protein
load_id: LOC_Os01g01040
primary_id: 78
gbrowse_dbid: general
Parts:
Name: LOC_Os01g01040.1
Type: mRNA
Source: MSU_osa1r7
Position: chr01:16292..20323 (+ strand)
Length: 4032
load_id: LOC_Os01g01040.1
parent_id: LOC_Os01g01040
primary_id: 79
Parts:
Type: exon
Source: MSU_osa1r7
Position: chr01:16292..16976 (+ strand)
Length: 685
load_id: LOC_Os01g01040.1:exon_1
parent_id: LOC_Os01g01040.1
primary_id: 80
Type: five_prime_UTR
Source: MSU_osa1r7
Position: chr01:16292..16598 (+ strand)
Length: 307
load_id: LOC_Os01g01040.1:utr_1
parent_id: LOC_Os01g01040.1
primary_id: 88
Type: CDS
Source: MSU_osa1r7
Position: chr01:16599..16976 (+ strand)
Length: 378
load_id: LOC_Os01g01040.1:cds_1
parent_id: LOC_Os01g01040.1
primary_id: 89
Type: exon
Source: MSU_osa1r7
Position: chr01:17383..17474 (+ strand)
Length: 92
load_id: LOC_Os01g01040.1:exon_2
parent_id: LOC_Os01g01040.1
primary_id: 81
Type: CDS
Source: MSU_osa1r7
Position: chr01:17383..17474 (+ strand)
Length: 92
load_id: LOC_Os01g01040.1:cds_2
parent_id: LOC_Os01g01040.1
primary_id: 90
Type: exon
Source: MSU_osa1r7
Position: chr01:17558..18258 (+ strand)
Length: 701
load_id: LOC_Os01g01040.1:exon_3
parent_id: LOC_Os01g01040.1
primary_id: 82
Type: CDS
Source: MSU_osa1r7
Position: chr01:17558..18258 (+ strand)
Length: 701
load_id: LOC_Os01g01040.1:cds_3
parent_id: LOC_Os01g01040.1
primary_id: 91
Type: exon
Source: MSU_osa1r7
Position: chr01:18501..18571 (+ strand)
Length: 71
load_id: LOC_Os01g01040.1:exon_4
parent_id: LOC_Os01g01040.1
primary_id: 83
Type: CDS
Source: MSU_osa1r7
Position: chr01:18501..18571 (+ strand)
Length: 71
load_id: LOC_Os01g01040.1:cds_4
parent_id: LOC_Os01g01040.1
primary_id: 92
Type: exon
Source: MSU_osa1r7
Position: chr01:18968..19057 (+ strand)
Length: 90
load_id: LOC_Os01g01040.1:exon_5
parent_id: LOC_Os01g01040.1
primary_id: 84
Type: CDS
Source: MSU_osa1r7
Position: chr01:18968..19057 (+ strand)
Length: 90
load_id: LOC_Os01g01040.1:cds_5
parent_id: LOC_Os01g01040.1
primary_id: 93
Type: exon
Source: MSU_osa1r7
Position: chr01:19142..19321 (+ strand)
Length: 180
load_id: LOC_Os01g01040.1:exon_6
parent_id: LOC_Os01g01040.1
primary_id: 85
Type: CDS
Source: MSU_osa1r7
Position: chr01:19142..19321 (+ strand)
Length: 180
load_id: LOC_Os01g01040.1:cds_6
parent_id: LOC_Os01g01040.1
primary_id: 94
Type: exon
Source: MSU_osa1r7
Position: chr01:19531..19629 (+ strand)
Length: 99
load_id: LOC_Os01g01040.1:exon_7
parent_id: LOC_Os01g01040.1
primary_id: 86
Type: CDS
Source: MSU_osa1r7
Position: chr01:19531..19593 (+ strand)
Length: 63
load_id: LOC_Os01g01040.1:cds_7
parent_id: LOC_Os01g01040.1
primary_id: 95
Type: three_prime_UTR
Source: MSU_osa1r7
Position: chr01:19594..19629 (+ strand)
Length: 36
load_id: LOC_Os01g01040.1:utr_2
parent_id: LOC_Os01g01040.1
primary_id: 96
Type: exon
Source: MSU_osa1r7
Position: chr01:19734..20323 (+ strand)
Length: 590
load_id: LOC_Os01g01040.1:exon_8
parent_id: LOC_Os01g01040.1
primary_id: 87
Type: three_prime_UTR
Source: MSU_osa1r7
Position: chr01:19734..20323 (+ strand)
Length: 590
load_id: LOC_Os01g01040.1:utr_3
parent_id: LOC_Os01g01040.1
primary_id: 97
Name: LOC_Os01g01040.4
Type: mRNA
Source: MSU_osa1r7
Position: chr01:16292..18304 (+ strand)
Length: 2013
load_id: LOC_Os01g01040.4
parent_id: LOC_Os01g01040
primary_id: 134
Parts:
Type: exon
Source: MSU_osa1r7
Position: chr01:16292..16976 (+ strand)
Length: 685
load_id: LOC_Os01g01040.4:exon_1
parent_id: LOC_Os01g01040.4
primary_id: 135
Type: five_prime_UTR
Source: MSU_osa1r7
Position: chr01:16292..16598 (+ strand)
Length: 307
load_id: LOC_Os01g01040.4:utr_1
parent_id: LOC_Os01g01040.4
primary_id: 138
Type: CDS
Source: MSU_osa1r7
Position: chr01:16599..16976 (+ strand)
Length: 378
load_id: LOC_Os01g01040.4:cds_1
parent_id: LOC_Os01g01040.4
primary_id: 139
Type: exon
Source: MSU_osa1r7
Position: chr01:17383..17474 (+ strand)
Length: 92
load_id: LOC_Os01g01040.4:exon_2
parent_id: LOC_Os01g01040.4
primary_id: 136
Type: CDS
Source: MSU_osa1r7
Position: chr01:17383..17474 (+ strand)
Length: 92
load_id: LOC_Os01g01040.4:cds_2
parent_id: LOC_Os01g01040.4
primary_id: 140
Type: exon
Source: MSU_osa1r7
Position: chr01:17558..18304 (+ strand)
Length: 747
load_id: LOC_Os01g01040.4:exon_3
parent_id: LOC_Os01g01040.4
primary_id: 137
Type: CDS
Source: MSU_osa1r7
Position: chr01:17558..18272 (+ strand)
Length: 715
load_id: LOC_Os01g01040.4:cds_3
parent_id: LOC_Os01g01040.4
primary_id: 141
Type: three_prime_UTR
Source: MSU_osa1r7
Position: chr01:18273..18304 (+ strand)
Length: 32
load_id: LOC_Os01g01040.4:utr_2
parent_id: LOC_Os01g01040.4
primary_id: 142
Name: LOC_Os01g01040.2
Type: mRNA
Source: MSU_osa1r7
Position: chr01:16321..20323 (+ strand)
Length: 4003
load_id: LOC_Os01g01040.2
parent_id: LOC_Os01g01040
primary_id: 98
Parts:
Type: exon
Source: MSU_osa1r7
Position: chr01:16321..16976 (+ strand)
Length: 656
load_id: LOC_Os01g01040.2:exon_1
parent_id: LOC_Os01g01040.2
primary_id: 99
Type: five_prime_UTR
Source: MSU_osa1r7
Position: chr01:16321..16598 (+ strand)
Length: 278
load_id: LOC_Os01g01040.2:utr_1
parent_id: LOC_Os01g01040.2
primary_id: 107
Type: CDS
Source: MSU_osa1r7
Position: chr01:16599..16976 (+ strand)
Length: 378
load_id: LOC_Os01g01040.2:cds_1
parent_id: LOC_Os01g01040.2
primary_id: 108
Type: exon
Source: MSU_osa1r7
Position: chr01:17383..17474 (+ strand)
Length: 92
load_id: LOC_Os01g01040.2:exon_2
parent_id: LOC_Os01g01040.2
primary_id: 100
Type: CDS
Source: MSU_osa1r7
Position: chr01:17383..17474 (+ strand)
Length: 92
load_id: LOC_Os01g01040.2:cds_2
parent_id: LOC_Os01g01040.2
primary_id: 109
Type: exon
Source: MSU_osa1r7
Position: chr01:17558..18258 (+ strand)
Length: 701
load_id: LOC_Os01g01040.2:exon_3
parent_id: LOC_Os01g01040.2
primary_id: 101
Type: CDS
Source: MSU_osa1r7
Position: chr01:17558..18258 (+ strand)
Length: 701
load_id: LOC_Os01g01040.2:cds_3
parent_id: LOC_Os01g01040.2
primary_id: 110
Type: exon
Source: MSU_osa1r7
Position: chr01:18501..18571 (+ strand)
Length: 71
load_id: LOC_Os01g01040.2:exon_4
parent_id: LOC_Os01g01040.2
primary_id: 102
Type: CDS
Source: MSU_osa1r7
Position: chr01:18501..18571 (+ strand)
Length: 71
load_id: LOC_Os01g01040.2:cds_4
parent_id: LOC_Os01g01040.2
primary_id: 111
Type: exon
Source: MSU_osa1r7
Position: chr01:18968..19057 (+ strand)
Length: 90
load_id: LOC_Os01g01040.2:exon_5
parent_id: LOC_Os01g01040.2
primary_id: 103
Type: CDS
Source: MSU_osa1r7
Position: chr01:18968..19057 (+ strand)
Length: 90
load_id: LOC_Os01g01040.2:cds_5
parent_id: LOC_Os01g01040.2
primary_id: 112
Type: exon
Source: MSU_osa1r7
Position: chr01:19142..19321 (+ strand)
Length: 180
load_id: LOC_Os01g01040.2:exon_6
parent_id: LOC_Os01g01040.2
primary_id: 104
Type: CDS
Source: MSU_osa1r7
Position: chr01:19142..19321 (+ strand)
Length: 180
load_id: LOC_Os01g01040.2:cds_6
parent_id: LOC_Os01g01040.2
primary_id: 113
Type: exon
Source: MSU_osa1r7
Position: chr01:19531..19629 (+ strand)
Length: 99
load_id: LOC_Os01g01040.2:exon_7
parent_id: LOC_Os01g01040.2
primary_id: 105
Type: CDS
Source: MSU_osa1r7
Position: chr01:19531..19593 (+ strand)
Length: 63
load_id: LOC_Os01g01040.2:cds_7
parent_id: LOC_Os01g01040.2
primary_id: 114
Type: three_prime_UTR
Source: MSU_osa1r7
Position: chr01:19594..19629 (+ strand)
Length: 36
load_id: LOC_Os01g01040.2:utr_2
parent_id: LOC_Os01g01040.2
primary_id: 115
Type: exon
Source: MSU_osa1r7
Position: chr01:19731..20323 (+ strand)
Length: 593
load_id: LOC_Os01g01040.2:exon_8
parent_id: LOC_Os01g01040.2
primary_id: 106
Type: three_prime_UTR
Source: MSU_osa1r7
Position: chr01:19731..20323 (+ strand)
Length: 593
load_id: LOC_Os01g01040.2:utr_3
parent_id: LOC_Os01g01040.2
primary_id: 116
Name: LOC_Os01g01040.3
Type: mRNA
Source: MSU_osa1r7
Position: chr01:16321..20323 (+ strand)
Length: 4003
load_id: LOC_Os01g01040.3
parent_id: LOC_Os01g01040
primary_id: 117
Parts:
Type: exon
Source: MSU_osa1r7
Position: chr01:16321..16976 (+ strand)
Length: 656
load_id: LOC_Os01g01040.3:exon_1
parent_id: LOC_Os01g01040.3
primary_id: 118
Type: five_prime_UTR
Source: MSU_osa1r7
Position: chr01:16321..16598 (+ strand)
Length: 278
load_id: LOC_Os01g01040.3:utr_1
parent_id: LOC_Os01g01040.3
primary_id: 125
Type: CDS
Source: MSU_osa1r7
Position: chr01:16599..16976 (+ strand)
Length: 378
load_id: LOC_Os01g01040.3:cds_1
parent_id: LOC_Os01g01040.3
primary_id: 126
Type: exon
Source: MSU_osa1r7
Position: chr01:17383..17474 (+ strand)
Length: 92
load_id: LOC_Os01g01040.3:exon_2
parent_id: LOC_Os01g01040.3
primary_id: 119
Type: CDS
Source: MSU_osa1r7
Position: chr01:17383..17474 (+ strand)
Length: 92
load_id: LOC_Os01g01040.3:cds_2
parent_id: LOC_Os01g01040.3
primary_id: 127
Type: exon
Source: MSU_osa1r7
Position: chr01:17558..18258 (+ strand)
Length: 701
load_id: LOC_Os01g01040.3:exon_3
parent_id: LOC_Os01g01040.3
primary_id: 120
Type: CDS
Source: MSU_osa1r7
Position: chr01:17558..18258 (+ strand)
Length: 701
load_id: LOC_Os01g01040.3:cds_3
parent_id: LOC_Os01g01040.3
primary_id: 128
Type: exon
Source: MSU_osa1r7
Position: chr01:18501..18571 (+ strand)
Length: 71
load_id: LOC_Os01g01040.3:exon_4
parent_id: LOC_Os01g01040.3
primary_id: 121
Type: CDS
Source: MSU_osa1r7
Position: chr01:18501..18571 (+ strand)
Length: 71
load_id: LOC_Os01g01040.3:cds_4
parent_id: LOC_Os01g01040.3
primary_id: 129
Type: exon
Source: MSU_osa1r7
Position: chr01:18968..19057 (+ strand)
Length: 90
load_id: LOC_Os01g01040.3:exon_5
parent_id: LOC_Os01g01040.3
primary_id: 122
Type: CDS
Source: MSU_osa1r7
Position: chr01:18968..19057 (+ strand)
Length: 90
load_id: LOC_Os01g01040.3:cds_5
parent_id: LOC_Os01g01040.3
primary_id: 130
Type: exon
Source: MSU_osa1r7
Position: chr01:19142..19321 (+ strand)
Length: 180
load_id: LOC_Os01g01040.3:exon_6
parent_id: LOC_Os01g01040.3
primary_id: 123
Type: CDS
Source: MSU_osa1r7
Position: chr01:19142..19321 (+ strand)
Length: 180
load_id: LOC_Os01g01040.3:cds_6
parent_id: LOC_Os01g01040.3
primary_id: 131
Type: exon
Source: MSU_osa1r7
Position: chr01:19531..20323 (+ strand)
Length: 793
load_id: LOC_Os01g01040.3:exon_7
parent_id: LOC_Os01g01040.3
primary_id: 124
Type: CDS
Source: MSU_osa1r7
Position: chr01:19531..19593 (+ strand)
Length: 63
load_id: LOC_Os01g01040.3:cds_7
parent_id: LOC_Os01g01040.3
primary_id: 132
Type: three_prime_UTR
Source: MSU_osa1r7
Position: chr01:19594..20323 (+ strand)
Length: 730
load_id: LOC_Os01g01040.3:utr_2
parent_id: LOC_Os01g01040.3
primary_id: 133